Fullscript logoThe Fullscript green leaf logo alongside the text FullscriptFullscript leaf logo
Lab companiesSign in
Create account
Doctor's Data

Microbiology Profile

Doctor's Data

Sample type: Stool

Requires fasting: No

At home test


Details

The Microbiology profile includes comprehensive bacteriology and yeast cultures to identify the presence of beneficial flora, imbalanced flora including Clostridium species, and dysbiotic flora, as well as detection of infectious pathogens. Antimicrobial susceptibility testing to prescriptive and natural agents is also performed for appropriate bacterial and fungal species at no additional charge.


  • Yeast Culture
  • Bacteria Culture

Estimated days for results: Results should arrive 6 to 8 days after the lab receives samples.

The Microbiology profile includes comprehensive bacteriology and yeast cultures to identify the presence of beneficial flora, imbalanced flora including Clostridium species, and dysbiotic flora, as well as detection of infectious pathogens.

Bacteriology
A good balance of beneficial microflora has been known to be associated with health benefits since the turn of the century. At that time, Metchnikoff drew attention to the adverse effects of dysbiotic gut microflora on the host and suggested that ingestion of fermented milk ameliorated what he called "autointoxication." He proposed that the consumption of large quantities of Lactobacillus species would reduce the number of toxin-producing bacteria and result in better health and increased lifespan.

Over the past 90-plus years there has been extensive scientific research demonstrating that a good balance of Lactobacilli, Bifidobacteria and beneficial E. coli bacteria are important to the functional health of the gut, and as a consequence, to the whole organism. The benefits identified include inhibition of microbial pathogens, prevention and treatment of antibiotic-associated diarrhea, prevention of travelers' diarrhea, reduction of lactose intolerance symptoms, reduction in serum cholesterol levels, enhancement of the immune system, and inhibition of the proliferation of Candida albicans. Research has shown that improved biological value of food can be achieved through the activity of Lactobacilli and Bifidobacteria which have been reported to produce folic acid, niacin, thiamin, riboflavin, pyridoxine, biotin and vitamin K.

The mechanisms by which these benefits are derived are not yet fully understood. However, research suggests that some of the beneficial effects may be due to the following activities of beneficial bacteria:
  • Release of substances antagonistic to enteropathogenic microorganisms such as:
    • lactocidin
    • lactobicillin
    • acidolin
  • Competition with pathogens for adhesion receptors
  • Production of lactase
  • Production of short chain fatty acids (SCFAs) such as butyrate, propionate and acetate

In a healthy balanced state of intestinal flora, the beneficial bacteria make up a significant proportion of the total microflora. However, in many individuals we see an imbalance of beneficial bacteria and an overgrowth of non-beneficial or even pathogenic microorganisms—dysbiosis. This can be due to a variety of factors including:
  • Daily exposure to chemicals in our drinking water that are toxic to friendly bacteria
  • The use of antibiotics
  • Chronic consumption of highly processed foods (low in fiber, high in sugar)
  • High stress levels

Patients may present with chronic symptoms such as irritable bowel syndrome, autoimmune diseases such as rheumatoid arthritis, fatigue, chronic headaches and allergies to a variety of foods.

Antimicrobial susceptibility testing to prescriptive and natural agents is also performed for appropriate bacterial species at no additional charge. This provides the clinician with important and specific clinical information to help plan an appropriate treatment protocol.

Yeast
Infection with yeast species can cause a variety of symptoms, both intra- and extra-gastrointestinal, and in many cases, may escape suspicion as a pathogenic agent. Controversy remains as to the relationship between Candida infection and episodes of recurrent diarrhea. However, episodes of yeast infection after short-term and long-term antibiotic use have been identified in patients with both gastrointestinal and vaginal symptoms.

There is some evidence linking yeast infections with more chronic extra-gastrointestinal conditions. Studies suggest that the production of antibodies against Candida albicans may contribute to atopic dermatitis in young adults. Other studies have identified the potential role of candidiasis in chronic fatigue syndrome.

Identification of abnormal levels of specific yeast species in the stool is an important diagnostic step in therapeutic planning for the patient with chronic gastrointestinal and extra-gastrointestinal symptoms.

Antimicrobial susceptibility testing to prescriptive and natural agents is also performed for appropriate fungal species at no additional charge. This provides the clinician with useful clinical information to help plan an appropriate treatment protocol.

Useful for:

  • Gastrointestinal Symptoms
  • Autoimmune Disease
  • Joint Pain
  • IBD/IBS
  • Inflammation
  • Food Sensitivities
  • Nutritional Deficiencies
  • Skin Conditions (Atopic Dermatitis)


6–8 business days


View here

  • Add-on: Comprehensive Clostridium Culture

Please read all of the directions, and familiarize yourself with the collection
procedures. If you are taking antifungal or antibiotic medications, please
finish the course of medication, and then wait three days before starting this
collection.

Please refrain from taking digestive enzymes, antacids, and aspirin
for two days prior to and during the specimen collection, unless otherwise
instructed by your physician. Refrain from taking probiotic supplements for
two weeks prior to specimen collection unless instructed otherwise by your
physician.

Never discontinue prescription medications without first consulting your physician.

State restrictions:

Patient can't order this test if they are located in Hawaii, Puerto Rico, New Jersey, New York, or Rhode Island

Provider pricing unlocks when you sign up

Go from test to plan, in one place

  • 2,500+ blood labs & specialty tests from partners you trust, one login

  • Turn results into personalized plans with Fullscript Assist

  • Competitive cash-pay pricing and nationwide phlebotomy

Create free accountBook a demo

Trusted by 50,000+ practitioners

20+

lab companies

Quest DiagnosticsAccess Medical Labs3x4 Genetics

40+

EHR integrations

Practice BetterCerboOptiMantra

Having labs on Fullscript has been a real time saver for my practice. I love the convenience and ability to order affordable labs quickly for my patients. It will be a staple in my workflow going forward.

Joseph Thomas, MD

Verified Fullscript practitioner